ArchedThunder
Banned
It's stated that he has a different backstory and that he was born again. They're as much different characters as the two Ridleys are, just one in scifi and the other is fantasy. It's also a different situation from something like Zelda II or the Oracle games where the old Ganon is brought back to life through Dark Magic. The Ganondorf in FSA isn't even a Gerudo.
I never played FSA and always heard it was just another resurrection, so I didn't know that. Also you are partly wrong.
He is still a Gerudo. Anyways this is still different than Ridley as the Other M Ridley was a new being created by cloning the DNA from the now dead Ridley. Ganon in FSA is a "natural" (fantasy natural) reincarnation of the essence of Ganon. It's the same as Link and Zelda and we already have two Links in the game.Hundreds of years later, in Four Swords Adventures, Ganon is reincarnated following his death in Twilight Princess. In this game, Ganondorf is referred to as a desert nomad, recently expelled from the Gerudo Tribe by breaking their taboo and exploring the Desert Pyramid as part of his plan to usurp the powers of others and coat Hyrule in darkness.