I think this game could very well be in my top 5 GOTY, I'll see once the year is out, I love the gameplay loop. Some things that annoy me though:
The damn Hugh walking on his own, whatever the fuck is causing this needs to be patched. It's not stick drift, my controller is fine, but it makes platforming sections annoying to do. I have to constantly push him in a direction on ledges so he doesn't just walk off on his own.
Maybe I still need to master the hacking aspect of it, but sometimes I'll be in the middle of hacking an enemy and the panel will swap to another hacking panel midway through the hack and I'm like wtf was that. It kept happening in one of the trials I was doing where I was hacking those bots that heal other bots and you gotta maneuver around the red nodes and then midway through it just swapped to another panel and I was like WTF? And then I had to let go of L2 and do it again. I don't know if this is a feature or something in the game caused it to swap to the hack of another nearby bot midway through and mess it up. Either way it's annoying.
Having to redo fighting rooms after going back to the shelter room is a little annoying. I get enemies respawning, but going back to get a collectible and having to enter a room that locks down and fight all the waves of enemies again is annoying. Once you clear it once, enemies should respawn after going back to your shelter room but the lockdown shouldn't happen so you can skip those fights to just run through and look for your collectible.
Those are my 3 main complaints.