I just came across this:
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Even while its super stupid to build your temple on the on the top of the one of your enemies, I think thats a very decent retcon
http://starwars.wikia.com/wiki/Sith_shrineThe Sith constructed a shrine on the planet Coruscant over five thousand years before the rise of the Galactic Empire. Following the Sith Order's defeat at the hands of their sworn enemies, the Jedi Order, the Jedi Temple was raised over the shrine's foundations in a symbolic attempt to bury the legacy that the Sith had left behind on the galactic capital. Millennia later, this decision would prove disastrous for the Jedi Order, as Darth Sidious, the reigning Dark Lord of the Sith, was able to make ample use of the wellspring of dark side energy that lay at the shrine's heart; clouding the vision of the Jedi Council, and masking his true motives and identity until it was too late.[1]
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Even while its super stupid to build your temple on the on the top of the one of your enemies, I think thats a very decent retcon