After the main cathedral steps, went to the left (your right if facing the cathedral entrance) and got grabbed and transported to two areas - Lecture Hall/Bldg (?! nothing in there... event went back and talked to the guy at the door again.), went into the 2nd area and took Amygdala out.
Soooooo... heeding advice went into the woods and still got lost - but eventually wandered into the three shadows. Wandered into the mansion... Rang the wrong bell (a mistake) and was dragged into the boss fight with Rom(?) and spider things (goddamnnnniit). Blitzed into the cave afterwards towards Iosefka's Clinic and dealt with her.
Went back to the invisible monster blocking the doorway to check things out - he still doesn't know Amygdala is dead.
This is the first time I'm wandering aimlessly (wherein Demons/Dark Souls/II, I never felt this way), basically I'm hunting bosses and not finding things that tie them together. The old guy in Hunter's Dream told me to go to the Healing Workshop, after that he's gone. (Probably tending to an apple tree or something). Anyone find their first playthrough a bit disjointed story-wise or I fucked up the order of things?
So I'm off to the bolt-powered dog... if i find it again.