Oh, a interesting thought I read.
I didn't even thought that way until reading posts here and elsewhere. I thought that they were playing to a similar relationship between Link and Dominic like with Anthony and Elias, but it's actually the other way around. Elias cares for his people, Dominic does not. He always goes on about "hearts and minds", but he only reaches the latter. He is dwelling in his supremacy, as the King on the chessboard.
What people suggested was, that Link would turn on Dominic, influenced by Anthony's words and the experience of seeing an Brotherhood that exists not only in name and become Elias new right hand man. Or left hand man, if Bruce is the actually right hand.